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Fall 2014
In this Issue of Spheres

A River Runs Through It

Pinpointing a Pint-sized Pest From On High

Have Funding, Will Travel

Carbon Bomb with a Long Fuse

News and Notes
Faculty, Staff, and Student News
From the Director

Institute for the Study of Earth,
Oceans, and Space
EOS Director: Harlan Spence
EOS Dir. of Finance & Admin.:
   Jo Beth Dudley

Editor: David Sims
Designer: Kristi Donahue
Circulation: Laurie Pinciak

Morse Hall, 8 College Road,
Durham, NH 03824


“This matters because it means carbon losses from some northern soils will contribute more than others.”








“But then a funny thing happened… I realized that the science hasn’t been synthesized and that I was able to bring many pieces from different fields together…”


Fall 2014

Earth Systems Science
Carbon Bomb with a Long Fuse
Ph.D. student makes key finding in the climate change puzzle

CLAIRE TREAT funded the bulk of her Ph.D. work by winning a graduate fellowship from the Department of Energy Office of Science for her proposal titled "Future of soil carbon in permafrost regions: The great northern carbon bomb?"

To conduct this bomb detection, Treat gathered a variety of soil samples from sites in Alaska, incubated them, and mimicked various environmental conditions in a lab back at UNH where she finally measured the subsequent amount of carbon. The gist of the research is that the amount of carbon released by the soil, and whether it occurs as carbon dioxide or as methane, will determine how much warming these northern soils will contribute to climate change.

claire treat  
Claire Treat with a frozen soil core
in Alaska's remote Innoko National
Wildlife Refuge.

Photo by Carmel Johnston, Montana State University.

Four years later, doctorate in hand and now a postdoc with the University of Alaska and the U.S. Geological Survey in Menlo Park, California, Treat says her dissertation work essentially found that not all permafrost is created equal and that the potential bomb appears to have a long fuse.

"That had been one of the assumptions going into the work—that all permafrost was this super labile soil/organic matter that within several decades of thawing would decompose and all this carbon would be released to the atmosphere and enhance climate change," Treat says. "But I found that's not necessarily the case."

To make the needed permafrost comparisons, Treat gathered some 200 samples from several different sites, including two boreal forests—one in Fairbanks and one within the Innoko National Wildlife Refuge 300 miles west of Fairbanks at the tip of Seward Peninsula—and two tundra sites around the University of Alaska Fairbanks Toolik Field Station on the North Slope above the Arctic Circle.

At UNH, for two years one would see Treat traversing between Morse Hall and other campus labs cradling armloads of plastic tubs filled with soil samples.

Her basic methodology was to let the jars of soil samples sit for a month while incubating at a constant temperature before drawing out gas with a syringe to measure how much carbon dioxide and methane had been produced.

Notes Treat, “In one case we made an incubation chamber out of an old freezer—took it apart and replaced the power switches to make it turn off and on and regulate the temperature. That was really cool, a real technological feat as far as I was concerned.”

Her sample analysis found there were very different carbon losses between the soils collected in the boreal and tundra areas. In the boreal peats, the active layer (the seasonally thawed surface soil layer), when heated up to an ideal incubation temperature released a lot of carbon while the permafrost didn’t.

“So that was an interesting finding,” says Treat, “and then I had to figure out why.”

She thinks it’s because the permafrost formation histories are different. That is, in the Arctic, because it’s so much colder, the permafrost forms in the soil before it gets a chance to decompose, whereas in the more southern, boreal sites, even small climate variations can cause permafrost degradation and decomposition.

soil sample  
Treat holds a 20-centimeter core
drilled from a site with intact
permafrost in the Innoko NWR.

Photo by Carmel Johnston, Montana State University.

"So the soils in the permafrost in the more southern, boreal sites are really old and highly decomposed, as opposed to really old and not decomposed, which was the thinking going into the research,” Treat says. This matters because it means carbon losses from some northern soils will contribute more than others.

The old freezer-turned incubator also came in handy for another part of Treat’s dissertation work with Wil Wollheim, co-director of the Water Systems Analysis Group within the Earth Systems Research Center (ESRC). Wollheim was working in the Alaskan tundra to determine whether climate change, through longer thawed seasons and shorter winters, was affecting nutrient cycling in streams. Treat and Wollheim, along with postdoc, Kyle Whittinghill, did field work at Toolik to ultimately measure nutrient concentrations in streams during the fall for the first time.

Says Treat, “There’s this seasonal asynchronicity during the fall, in which microbes within the soil continue to decompose soil organic matter but plants are dormant and so the nutrient released during decomposition winds up in streams. For my dissertation work, I tested this using the freezer and some lights to simulate an Arctic summer, and measured the leaching nutrient losses to confirm that the soils could be releasing high amounts of nutrients during the fall.”

Click here to view a short video of Treat and her Ph.D. advisor Wil Wollheim drilling core samples in Alaska.

Synthesis science, missing microbes

  soil core
Gas-powered auger with a peat corer
barrel attached.

Photo by Adam Wlostowski, Penn State University.

Another aspect of Treat’s Ph.D. work, which was supplemented for a year by a UNH Graduate School Fellowship, was doing a comprehensive synthesis of previous studies similar to her incubation experiments.

“I conducted an anaerobic incubation synthesis where I and several colleagues compiled data from previous studies and looked for large-scale trends,” says Treat.

For a while during the process of synthesizing twenty years worth of publications on the subject methane anaerobic incubation, Treat wondered whether or not she was pushing the science forward or simply pushing paper.

“But then a funny thing happened as I was writing the conclusion section of my dissertation. I considered what my work actually meant in a broader context and then realized that the science hasn’t been synthesized and that I was able to bring many pieces from different fields together, as well as add some important new understanding.

For example, the incubation work at UNH revealed that carbon losses from the permafrost in particular are dependent on the substrate, specifically, how decomposed it is and its condition—warm, cold, aerobic or anaerobic—and on the inherent microbial communities.

“The research I’ve done adds an important new element, specifically, now we have a lot better understanding of how microbes play a part, and it turns out they are important.” She adds, “And that’s an area we just don’t know too much about. Quantifying the microbial aspect is totally new, and I think my research has been helpful in framing it.”

soil sample  
A soil core showing surface peat, which has lots of sphagnum moss bits, and permafrost peat. This core is from the Toolik Field Station on the North Slope above the Arctic Circle.
Photo by Claire Treat, UNH-EOS.

The results from the synthesis project revealed a lag period between the beginning of incubation and maximum methane flux, which is a totally different pattern than carbon dioxide production.

“We were trying to figure out why this lag time occurred because, in the field, it would mean there may not be methane production occurring for awhile after you get the right conditions,” says Treat. “I have two working hypotheses—one is that it’s simply a function of the biogeochemistry, and the other is that the microbes just aren’t there or aren’t active. When I was looking for information on that in the synthesis project it was not particularly easy to find.”

Although further investigation into this will not be part of her postdoc work, Treat believes it is an important scientific area to investigate.

Modeling methane

As part of her postdoc work, Treat will be working with ESRC’s Steve Frolking (a member of her Ph.D. committee), current supervisor Miriam Jones of the USGS, and Katie Walter Anthony of the University of Alaska Fairbanks compiling fossilized wetland vegetation datasets to look at species composition and peatland extent in the panarctic.

“The broad idea of the synthesis is to look at trends in Holocene methane emissions because certain signatures from peat samples indicate there was a higher terrestrial methane source around 7500 years ago. They haven’t figured out what caused it but there are a few competing theories—one is peatland expansion and I think another is methane clathrate destabilization.”

Methane clathrate, also known as methane ice, is a compound in which a large amount of methane is trapped within a crystal structure of water forming a solid similar to ice.

As for that ominous carbon bomb she initially set out to detect, Treat says,
“ I think Steve put it pretty well—it has a long fuse—because there are so many variables and a lot of thermal inertia in the system. I think the expert projections are that it will really start to have an influence on climate in a hundred years and I think that’s realistic, I don’t think it’s going to happen in the next 10 years.”

by David Sims, Science Writer, Institute for the Study of Earth, Oceans, and Space.

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